Cba_g29942


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29942

Target Alias Description ECC score Gene Family Method Actions
Adi_g004333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.06 OrthoFinder output from all 47 species
Cba_g07157 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45912 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76834 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18764 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24762 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08599 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g16794 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52009 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06627 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14701 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g04292 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06205 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20612 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05910 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008151 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013552 No alias not classified & original description: CDS=1-2598 0.04 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo77426 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 3 39
IPR002885 Pentatricopeptide_repeat 60 91
IPR046848 E_motif 111 157
No external refs found!