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  5. Cba_g29521

Cba_g29521


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29521

Target Alias Description ECC score Gene Family Method Actions
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.03 OrthoFinder output from all 47 species
Aev_g03176 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09866 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06352.t1 Aspi01Gene06352 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g026970 BHLH32, ATAIG1, TMO5 bHLH-type transcription factor & original description: CDS=50-919 0.02 OrthoFinder output from all 47 species
Cba_g09602 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os03g15440.1 LOC_Os03g15440 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07120.1 LOC_Os05g07120 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g17973 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 180 226
No external refs found!