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  5. Cba_g29511

Cba_g29511 (MYBR1, MYB44, ATMYB44, ATMYBR1)


Aliases : MYBR1, MYB44, ATMYB44, ATMYBR1

Description : MYB class-R2R3 subgroup-22/23 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29511

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00183640 AtMYB109,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009566001 MYB70, AtMYB70 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43420.1 AtMYB124,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Lfl_g28837 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13295 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pp3c15_19246V3.1 AtMYB98, MYB98,... myb domain protein 3r-4 0.01 OrthoFinder output from all 47 species
Pp3c17_19947V3.1 AtMYB124,... myb domain protein 88 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 73 115
IPR001005 SANT/Myb 19 65
No external refs found!