Cba_g29359 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29359

Target Alias Description ECC score Gene Family Method Actions
Adi_g002514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044807 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18405 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30770 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32066 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61086 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09035 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27919 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10753 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02464.t1 Aspi01Gene02464 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17591.t1 Aspi01Gene17591 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34803.t1 Aspi01Gene34803 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70575.t1 Aspi01Gene70575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70773.t1 OTP84, Aspi01Gene70773 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71401.t2 Aspi01Gene71401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.02 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Azfi_s1010.g095171 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Cba_g04703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g05330 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20876 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26848 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.03 OrthoFinder output from all 47 species
Ceric.36G017300.1 Ceric.36G017300 not classified & original description: pacid=50568624... 0.03 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Gb_04886 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g01382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18893 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38675 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50232 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29276 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g03248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo86032 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22999 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 108 156
IPR002885 Pentatricopeptide_repeat 21 39
No external refs found!