Cba_g29254


Description : uridine 5-carboxymethylaminomethyl modification enzyme *(GidA) & original description: none


Gene families : OG0005421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29254

Target Alias Description ECC score Gene Family Method Actions
AT2G13440 No alias glucose-inhibited division family A protein 0.04 OrthoFinder output from all 47 species
Adi_g013172 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.03 OrthoFinder output from all 47 species
Ala_g08972 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.03 OrthoFinder output from all 47 species
Als_g08563 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.03 OrthoFinder output from all 47 species
Dac_g00971 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72980.1 LOC_Os01g72980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24318 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.04 OrthoFinder output from all 47 species
Lfl_g04103 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.02 OrthoFinder output from all 47 species
Mp2g24040.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR040131 MnmG_N 130 521
IPR026904 MnmG_C 524 738
No external refs found!