AMTR_s00031p00169220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00031.77

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS25 component


Gene families : OG_01_0002355 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002355_tree ,
OG_02_0002220 (LandPlants) Phylogenetic Tree(s): OG_02_0002220_tree ,
OG_03_0002447 (SeedPlants) Phylogenetic Tree(s): OG_03_0002447_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00031p00169220
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT2G21580 No alias Ribosomal protein S25 family protein 0.09 Archaeplastida
AT4G34555 No alias Ribosomal protein S25 family protein 0.07 Archaeplastida
AT4G39200 No alias Ribosomal protein S25 family protein 0.09 Archaeplastida
Cpa|evm.model.tig00000037.5 No alias 40S ribosomal protein S25-4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
GSVIVT01000974001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
GSVIVT01010721001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
GSVIVT01023806001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Gb_01693 No alias component RPS25 of SSU proteome 0.07 Archaeplastida
Gb_29693 No alias component RPS25 of SSU proteome 0.05 Archaeplastida
LOC_Os08g44480.1 No alias component RPS25 of SSU proteome 0.08 Archaeplastida
LOC_Os09g39540.1 No alias component RPS25 of SSU proteome 0.07 Archaeplastida
LOC_Os11g05562.1 No alias component RPS25 of SSU proteome 0.07 Archaeplastida
MA_104137g0010 No alias component RPS25 of SSU proteome 0.11 Archaeplastida
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.08 Archaeplastida
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.06 Archaeplastida
Pp3c14_13580V3.1 No alias Ribosomal protein S25 family protein 0.1 Archaeplastida
Pp3c17_4670V3.1 No alias Ribosomal protein S25 family protein 0.1 Archaeplastida
Pp3c1_25330V3.1 No alias Ribosomal protein S25 family protein 0.09 Archaeplastida
Smo172404 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Solyc02g069850.3.1 No alias component RPS25 of SSU proteome 0.04 Archaeplastida
Zm00001e003921_P001 No alias component RPS25 of SSU proteome 0.08 Archaeplastida
Zm00001e019589_P001 No alias component RPS25 of SSU proteome 0.09 Archaeplastida
Zm00001e028930_P001 No alias component RPS25 of SSU proteome 0.05 Archaeplastida
AT2G21580 No alias Ribosomal protein S25 family protein 0.09 LandPlants
AT4G34555 No alias Ribosomal protein S25 family protein 0.06 LandPlants
AT4G39200 No alias Ribosomal protein S25 family protein 0.09 LandPlants
GSVIVT01000974001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 LandPlants
GSVIVT01010721001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
Gb_01693 No alias component RPS25 of SSU proteome 0.07 LandPlants
Gb_29693 No alias component RPS25 of SSU proteome 0.05 LandPlants
LOC_Os08g44480.1 No alias component RPS25 of SSU proteome 0.08 LandPlants
LOC_Os09g39540.1 No alias component RPS25 of SSU proteome 0.07 LandPlants
LOC_Os11g05562.1 No alias component RPS25 of SSU proteome 0.07 LandPlants
MA_104137g0010 No alias component RPS25 of SSU proteome 0.11 LandPlants
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.07 LandPlants
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.06 LandPlants
Pp3c14_13580V3.1 No alias Ribosomal protein S25 family protein 0.09 LandPlants
Pp3c17_4670V3.1 No alias Ribosomal protein S25 family protein 0.08 LandPlants
Pp3c1_25330V3.1 No alias Ribosomal protein S25 family protein 0.08 LandPlants
Smo172404 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 LandPlants
Solyc02g069850.3.1 No alias component RPS25 of SSU proteome 0.04 LandPlants
Zm00001e003921_P001 No alias component RPS25 of SSU proteome 0.07 LandPlants
Zm00001e019589_P001 No alias component RPS25 of SSU proteome 0.07 LandPlants
Zm00001e028930_P001 No alias component RPS25 of SSU proteome 0.05 LandPlants
AT2G21580 No alias Ribosomal protein S25 family protein 0.09 SeedPlants
AT4G34555 No alias Ribosomal protein S25 family protein 0.06 SeedPlants
AT4G39200 No alias Ribosomal protein S25 family protein 0.09 SeedPlants
GSVIVT01000974001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 SeedPlants
GSVIVT01010721001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 SeedPlants
Gb_01693 No alias component RPS25 of SSU proteome 0.07 SeedPlants
Gb_29693 No alias component RPS25 of SSU proteome 0.05 SeedPlants
LOC_Os08g44480.1 No alias component RPS25 of SSU proteome 0.08 SeedPlants
LOC_Os09g39540.1 No alias component RPS25 of SSU proteome 0.07 SeedPlants
LOC_Os11g05562.1 No alias component RPS25 of SSU proteome 0.07 SeedPlants
MA_104137g0010 No alias component RPS25 of SSU proteome 0.11 SeedPlants
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.07 SeedPlants
Solyc02g069850.3.1 No alias component RPS25 of SSU proteome 0.04 SeedPlants
Zm00001e003921_P001 No alias component RPS25 of SSU proteome 0.07 SeedPlants
Zm00001e019589_P001 No alias component RPS25 of SSU proteome 0.07 SeedPlants
Zm00001e028930_P001 No alias component RPS25 of SSU proteome 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 1 106
No external refs found!