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  5. Cba_g27376

Cba_g27376 (WIP2, NTT)


Aliases : WIP2, NTT

Description : C2H2 subclass WIP transcription factor & original description: none


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27376

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0011.g012566 WIP5 C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033329001 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g63980.1 WIP4, LOC_Os01g63980 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_4130g0010 WIP5 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g18497 WIP5 C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo57114 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc01g087050.3.1 WIP2, NTT, Solyc01g087050 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Solyc05g009770.3.1 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e026959_P001 WIP5, Zm00001e026959 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 226 245
No external refs found!