1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g27219

Cba_g27219


Description : not classified & original description: none


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g27219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.05 OrthoFinder output from all 47 species
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
Adi_g052232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49491 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g06469 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g05632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07926 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g00730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67250.t1 Aspi01Gene67250 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G052400.1 Ceric.23G052400 not classified & original description: pacid=50610225... 0.07 OrthoFinder output from all 47 species
Ceric.32G057300.1 Ceric.32G057300 not classified & original description: pacid=50597506... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001258.10 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.8 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
Cre16.g674950 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Dac_g12181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23383 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g06829 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023233001 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Gb_39487 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_39488 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.09 OrthoFinder output from all 47 species
Lfl_g05426 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014061 No alias not classified & original description: CDS=115-1746 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021866 No alias not classified & original description: CDS=168-1886 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025671 No alias not classified & original description: CDS=41-1720 0.04 OrthoFinder output from all 47 species
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.05 OrthoFinder output from all 47 species
Solyc05g010180.4.1 Solyc05g010180 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.05 OrthoFinder output from all 47 species
Spa_g07332 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g10638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23774 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 73 569
No external refs found!