MA_1793g0010


Description : 33.99 development.unspecified Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR. SCARECROW (SCR)


Gene families : OG_01_0003343 (Gene family) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_1793g0010
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029824001 No alias 33.99 development.unspecified Encodes a member of a... 0.04 Gene family
LOC_Os12g02870 Os12g0122000 33.99 development.unspecified Encodes a member of a... 0.02 Gene family
Solyc07g043330.2.1 Solyc07g043330.2 33.99 development.unspecified GRAS family transcription factor 0.03 Gene family
Solyc10g074680.2.1 Solyc10g074680.2 33.99 development.unspecified Encodes a member of a... 0.02 Gene family
Zm00001d052380 GRMZM2G131516 33.99 development.unspecified Encodes a member of a... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005202 TF_GRAS 478 835
No external refs found!