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Description : GARP subgroup HHO transcription factor & original description: none
Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g25602 | |
| Cluster | HCCA: Cluster_250 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G49560 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G045700.1 | Ceric.21G045700 | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03915 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015462001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031804001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03168 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08106 | No alias | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40586 | No alias | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_33594g0010 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25323 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37435 | No alias | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g006800.2.1 | Solyc12g006800 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| MF | GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 252 | 303 |
| No external refs found! |