Cba_g25491


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25491

Target Alias Description ECC score Gene Family Method Actions
Adi_g098989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10792 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28224 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16765 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11318.t1 CRR22, Aspi01Gene11318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038894 CRR2 not classified & original description: CDS=273-1679 0.03 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.04 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.04 OrthoFinder output from all 47 species
Ceric.1Z239000.1 Ceric.1Z239000 not classified & original description: pacid=50639198... 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.02 OrthoFinder output from all 47 species
Ceric.34G009600.1 Ceric.34G009600 not classified & original description: pacid=50623440... 0.04 OrthoFinder output from all 47 species
Ceric.39G004000.1 EMB2758, Ceric.39G004000 not classified & original description: pacid=50582620... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12454 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31126 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15722 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36053 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Len_g57345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48107 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20613 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.02 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022166 No alias not classified & original description: CDS=1-2514 0.04 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 168 214
IPR002885 Pentatricopeptide_repeat 67 112
IPR002885 Pentatricopeptide_repeat 142 166
IPR002885 Pentatricopeptide_repeat 40 63
No external refs found!