Cba_g25488


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00063250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g12775,... 0.04 OrthoFinder output from all 47 species
AT1G63630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g015683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.02 OrthoFinder output from all 47 species
Len_g07378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10286643g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.02 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100394 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.02 OrthoFinder output from all 47 species
Smo52385 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 OrthoFinder output from all 47 species
Tin_g19161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 43 92
IPR002885 Pentatricopeptide_repeat 4 36
No external refs found!