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  5. Cba_g25339

Cba_g25339


Description : not classified & original description: none


Gene families : OG0003690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25339
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g017591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25113 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g63223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21728 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g48240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66576 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g66770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20280 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48766 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18063 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19655 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29857 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g57446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!