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  5. Cba_g25246

Cba_g25246 (FCA)


Aliases : FCA

Description : transcription factor *(FCA/SSF) & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25246

Target Alias Description ECC score Gene Family Method Actions
Aob_g24337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G016000.1 Ceric.06G016000 not classified & original description: pacid=50619514... 0.03 OrthoFinder output from all 47 species
Nbi_g02118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08750 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19709 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05004 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001202 WW_dom 570 596
IPR000504 RRM_dom 174 236
IPR000504 RRM_dom 83 147
No external refs found!