MA_178775g0020


Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A8 (EXPA8)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_178775g0020
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034162001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_61945g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
Smo231226 PACid_15415243 10.7 cell wall.modification Encodes an expansin. Naming... 0.01 Gene family
Smo91129 PACid_15413212 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
Solyc03g115270.2.1 Solyc03g115270.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc03g115300.2.1 Solyc03g115300.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc03g115310.1.1 Solyc03g115310.1 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.01 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 19 105
No external refs found!