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  5. Cba_g24942

Cba_g24942


Description : not classified & original description: none


Gene families : OG0011229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24942

Target Alias Description ECC score Gene Family Method Actions
Adi_g013464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 897 922
IPR002885 Pentatricopeptide_repeat 695 718
IPR002885 Pentatricopeptide_repeat 493 516
IPR002885 Pentatricopeptide_repeat 923 971
IPR002885 Pentatricopeptide_repeat 720 767
IPR002885 Pentatricopeptide_repeat 619 666
IPR002885 Pentatricopeptide_repeat 822 868
IPR002885 Pentatricopeptide_repeat 418 465
IPR002885 Pentatricopeptide_repeat 519 565
IPR002885 Pentatricopeptide_repeat 317 364
IPR002885 Pentatricopeptide_repeat 215 262
IPR002885 Pentatricopeptide_repeat 278 315
No external refs found!