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  5. Cba_g24716

Cba_g24716 (VSR2;2, ATVSR3, BP80-2;2, VSR3)


Aliases : VSR2;2, ATVSR3, BP80-2;2, VSR3

Description : lytic vacuole protein sorting receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24716

Target Alias Description ECC score Gene Family Method Actions
Adi_g024445 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Adi_g051956 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Aev_g07171 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g30429 VSR6, VSR3;3, BP80-3;3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037845001 VSR2;2, ATVSR3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.04 OrthoFinder output from all 47 species
LOC_Os03g21720.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Len_g15587 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03360 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Ore_g12704 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Pir_g19550 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005212 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008191 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g35259 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g074980.2.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
Tin_g04673 VSR2;2, ATVSR3,... lytic vacuole protein sorTing receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035858_P001 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 75 165
No external refs found!