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  5. Cba_g24087

Cba_g24087 (PTB2, ATPTB2)


Aliases : PTB2, ATPTB2

Description : RNA splicing factor *(PTB) & original description: none


Gene families : OG0001527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001527_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cba_g24087

Target Alias Description ECC score Gene Family Method Actions
Aop_g08592 PTB2, ATPTB2 RNA splicing factor *(PTB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42384.t1 PTB2, ATPTB2,... RNA splicing factor *(PTB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G100400.1 PTB2, ATPTB2,... RNA splicing factor *(PTB) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g44883 PTB2, ATPTB2 RNA splicing factor *(PTB) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013166 PTB1, PTB, ATPTB1 not classified & original description: CDS=1-306 0.03 OrthoFinder output from all 47 species
Sam_g29798 No alias RNA splicing factor *(PTB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36099 No alias RNA splicing factor *(PTB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037953_P002 Zm00001e037953 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 22 72
IPR021790 PTBP1-like_RRM2 242 320
No external refs found!