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  5. Cba_g24062

Cba_g24062


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24062

Target Alias Description ECC score Gene Family Method Actions
Adi_g007845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g122099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g51590.1 LOC_Os05g51590 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.02 OrthoFinder output from all 47 species
Len_g20730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013885 No alias not classified & original description: CDS=1-2919 0.02 OrthoFinder output from all 47 species
Tin_g16977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 114 239
No external refs found!