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  5. Cba_g24057

Cba_g24057


Description : not classified & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g24057

Target Alias Description ECC score Gene Family Method Actions
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Azfi_s0204.g057707 No alias not classified & original description: CDS=495-1133 0.03 OrthoFinder output from all 47 species
Ceric.01G102400.1 Ceric.01G102400 not classified & original description: pacid=50593041... 0.05 OrthoFinder output from all 47 species
Dcu_g23599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g57990.1 LOC_Os03g57990 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g09970.1 LOC_Os07g09970 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Len_g37455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.03 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g05603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 46 132
No external refs found!