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  5. Cba_g23701

Cba_g23701


Description : not classified & original description: none


Gene families : OG0003028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23701
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Als_g20626 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Aob_g30238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65968 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g71865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g32739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19812 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001425 Arc/bac/fun_rhodopsins 36 255
No external refs found!