Lfl_g33029


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g33029

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71861.t1 CRR2, Aspi01Gene71861 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.07 OrthoFinder output from all 47 species
Azfi_s0073.g037188 CRR22 not classified & original description: CDS=1-1875 0.07 OrthoFinder output from all 47 species
Cba_g20428 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37780 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_75512g0010 DOT4 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g04475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g06582 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38695 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57997 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo101093 EMB2261 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo328 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Spa_g23958 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 216 238
IPR002885 Pentatricopeptide_repeat 241 289
IPR002885 Pentatricopeptide_repeat 35 82
IPR002885 Pentatricopeptide_repeat 138 185
No external refs found!