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  5. Cba_g23335

Cba_g23335


Description : 5,10-methenyl-THF synthetase & original description: none


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g23335
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Ala_g06033 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05916 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01289 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g02610.1 No alias 5,10-methenyl-THF synthetase 0.01 OrthoFinder output from all 47 species
Msp_g48305 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09827 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06813 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30533 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002698 FTHF_cligase 140 338
IPR000504 RRM_dom 416 484
No external refs found!