1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g22914

Cba_g22914 (Tudor1, AtTudor1, TSN1)


Aliases : Tudor1, AtTudor1, TSN1

Description : mRNA endoribonuclease *(TSN) & original description: none


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22914

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00246090 Tudor1,... RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
AT5G07350 Tudor1, AtTudor1, TSN1 TUDOR-SN protein 1 0.03 OrthoFinder output from all 47 species
AT5G61780 TSN2, Tudor2, AtTudor2 TUDOR-SN protein 2 0.03 OrthoFinder output from all 47 species
Ala_g08386 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01168 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18577 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.71 TSN2, Tudor2, AtTudor2 RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Dde_g04451 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005677001 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Ore_g20110 TSN2, Tudor2, AtTudor2 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11394 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32209 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08514 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.04 OrthoFinder output from all 47 species
Smo165776 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Solyc03g118010.4.1 Tudor1,... ribonuclease (TSN) 0.03 OrthoFinder output from all 47 species
Solyc03g118020.3.1 Tudor1,... ribonuclease (TSN) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 131 239
IPR016071 Staphylococal_nuclease_OB-fold 365 456
IPR016071 Staphylococal_nuclease_OB-fold 725 823
IPR002999 Tudor 842 970
No external refs found!