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  5. Cba_g22725

Cba_g22725


Description : not classified & original description: none


Gene families : OG0000974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22725

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00185010 evm_27.TU.AmTr_v1... Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g08810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015100 No alias not classified & original description: CDS=38-2224 0.05 OrthoFinder output from all 47 species
Azfi_s0081.g038650 No alias not classified & original description: CDS=64-1644 0.02 OrthoFinder output from all 47 species
Cba_g10031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032763001 No alias Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_34663 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56380.1 LOC_Os03g56380 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g02168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_93797g0010 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002237 No alias not classified & original description: CDS=481-2598 0.04 OrthoFinder output from all 47 species
Sam_g10468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo140935 No alias Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g080360.4.1 Solyc04g080360 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g14022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005847_P001 Zm00001e005847 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027288_P002 Zm00001e027288 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 252 746
No external refs found!