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  5. Cba_g22715

Cba_g22715 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22715
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Adi_g057088 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Adi_g076049 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112628 AFB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01669.t1 AFB2, Aspi01Gene01669 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Lfl_g03292 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Pir_g01947 COI1 component *(COI) of jasmonic acid receptor complex &... 0.06 OrthoFinder output from all 47 species
Spa_g05740 COI1 component *(COI) of jasmonic acid receptor complex &... 0.07 OrthoFinder output from all 47 species
Tin_g00940 AFB2 substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Tin_g01156 COI1 component *(COI) of jasmonic acid receptor complex &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 10 48
IPR041101 Transp_inhibit 67 113
No external refs found!