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  5. Cba_g22517

Cba_g22517 (CLA, DXS, CLA1, DEF, DXPS2)


Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: none


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22517

Target Alias Description ECC score Gene Family Method Actions
AT3G21500 DXPS1 1-deoxy-D-xylulose 5-phosphate synthase 1 0.04 OrthoFinder output from all 47 species
Als_g15658 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.09 OrthoFinder output from all 47 species
Aob_g06658 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16013.t1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Aspi01Gene17606.t1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Aspi01Gene43039.t1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Ceric.03G098900.1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Ehy_g14623 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
GSVIVT01017832001 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
Gb_34070 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.02 OrthoFinder output from all 47 species
Len_g30796 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.01 OrthoFinder output from all 47 species
Len_g35283 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Mp4g14720.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.04 OrthoFinder output from all 47 species
Nbi_g06265 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Ore_g37260 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014635 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Sam_g10011 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Solyc11g010850.2.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 423 583
IPR005477 Dxylulose-5-P_synthase 98 385
IPR033248 Transketolase_C 601 724
No external refs found!