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  5. Cba_g22464

Cba_g22464


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22464

Target Alias Description ECC score Gene Family Method Actions
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g30627 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G045700.1 Ceric.21G045700 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g10381 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02562 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031804001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08160.1 LOC_Os01g08160 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g03168 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g40586 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Mp4g15170.1 No alias G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Msp_g25323 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g33222 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g14104 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05162 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g29341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37435 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc12g006800.2.1 Solyc12g006800 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 273 324
No external refs found!