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  5. Cba_g22463

Cba_g22463


Description : component *(uL2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22463

Target Alias Description ECC score Gene Family Method Actions
Cre12.g535851 EMB2296 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
MA_10431163g0010 No alias component RPL8 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g00494 No alias component *(uL2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 1 118
No external refs found!