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  5. Cba_g22090

Cba_g22090


Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0000360 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g22090

Target Alias Description ECC score Gene Family Method Actions
Aev_g28728 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24168 EMB1276, ACAT2 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38829 PKT4, KAT1 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33884 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012735_P002 KAT2, PKT3,... 3-ketoacyl-CoA thiolase (KAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR020616 Thiolase_N 18 275
IPR020617 Thiolase_C 285 406
No external refs found!