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Cba_g21999


Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g21999

Target Alias Description ECC score Gene Family Method Actions
Adi_g054844 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dac_g22345 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ehy_g06047 SZF2, ATSZF2, ZFAR1, CZF1 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Gb_38616 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Ore_g20985 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Solyc05g052570.3.1 SZF2, ATSZF2,... mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 257 277
No external refs found!