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Cba_g21854 (DegP9)


Aliases : DegP9

Description : protease *(Deg) & original description: none


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g21854
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Adi_g037782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10404 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06473 DegP9 protease (Deg) 0.04 OrthoFinder output from all 47 species
MA_176437g0010 DegP10 protease (Deg) 0.02 OrthoFinder output from all 47 species
MA_7242206g0010 DegP10 protease (Deg) 0.04 OrthoFinder output from all 47 species
Pnu_g10413 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019296 DegP9 protease *(Deg) & original description: CDS=177-2603 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0298.g027194 DegP10 protease *(Deg) & original description: CDS=44-1906 0.02 OrthoFinder output from all 47 species
Spa_g10123 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11965 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031683_P001 DegP10, Zm00001e031683 protease (Deg) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 489 634
IPR001478 PDZ 381 482
No external refs found!