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  5. Cba_g21761

Cba_g21761


Description : gamma-aminobutyric acid transporter *(GAT) & original description: none


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g21761
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Dac_g01555 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10782 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034729001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_39427 No alias gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Gb_41065 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
LOC_Os01g43320.1 LOC_Os01g43320 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63854.1 LOC_Os01g63854 gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50920.1 LOC_Os05g50920 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Lfl_g06586 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
MA_9942560g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Mp5g14240.1 No alias gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Nbi_g00785 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04812 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Ore_g20340 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g15229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25018 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g29689 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50744 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 42 448
No external refs found!