Aliases : SHP2, AGL5
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00198970 | XAL1, AGL12,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00140p00045380 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g106519 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g28471 | SHP2, AGL5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene15809.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17817.t1 | AGL6, Aspi01Gene17817 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17822.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene50728.t1 | STK, AGL11,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0009.g011735 | STK, AGL11 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g38953 | AGL18 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008560001 | SOC1, AGL20, ATSOC1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012110001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01019883001 | GL19, AGL19 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025945001 | STK, AGL11 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026207001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033067001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035477001 | AGL30 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
Gb_19897 | AGL16 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g23910.1 | AGL16, LOC_Os04g23910 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g11970.1 | AGL66, LOC_Os06g11970 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g22760.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Len_g26280 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g06990 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g25344 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06487 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g078300.3.1 | AGL104, Solyc04g078300 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g55244 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEP | HCCA |
BP | GO:0008037 | cell recognition | IEP | HCCA |
BP | GO:0048544 | recognition of pollen | IEP | HCCA |
No external refs found! |