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  5. Cba_g20839

Cba_g20839 (CLA, DXS, CLA1, DEF, DXPS2)


Aliases : CLA, DXS, CLA1, DEF, DXPS2

Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: none


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20839

Target Alias Description ECC score Gene Family Method Actions
AT4G15560 CLA, DXS, CLA1,... Deoxyxylulose-5-phosphate synthase 0.05 OrthoFinder output from all 47 species
Aob_g06658 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Ceric.28G050500.1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.39 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.01 OrthoFinder output from all 47 species
Cre07.g356350 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33840.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.04 OrthoFinder output from all 47 species
Len_g06184 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Lfl_g07086 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Mp2g09130.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.07 OrthoFinder output from all 47 species
Nbi_g08983 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Sam_g07986 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Tin_g19065 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Zm00001e031654_P001 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005477 Dxylulose-5-P_synthase 75 360
IPR033248 Transketolase_C 576 699
IPR005475 Transketolase-like_Pyr-bd 398 558
No external refs found!