Cba_g20819


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20819

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21523 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06327 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07415 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18223 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18789 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19265 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30420 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30578 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33935 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008663 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g07445 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29993 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67449 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67869 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67874 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G104800.1 Ceric.04G104800 not classified & original description: pacid=50632059... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.03 OrthoFinder output from all 47 species
Ceric.21G062900.1 Ceric.21G062900 not classified & original description: pacid=50604156... 0.03 OrthoFinder output from all 47 species
Ceric.23G037900.1 Ceric.23G037900 not classified & original description: pacid=50609724... 0.03 OrthoFinder output from all 47 species
Ceric.33G035100.1 Ceric.33G035100 not classified & original description: pacid=50606945... 0.02 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g20901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21308 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05980 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07395 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.03 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 512 539
IPR002885 Pentatricopeptide_repeat 549 573
IPR002885 Pentatricopeptide_repeat 112 134
IPR002885 Pentatricopeptide_repeat 476 505
IPR046848 E_motif 591 627
IPR002885 Pentatricopeptide_repeat 372 419
IPR002885 Pentatricopeptide_repeat 255 301
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 137 186
No external refs found!