Cba_g20733


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20733

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00222920 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00029450 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species
Adi_g053082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26591 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26957 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29503 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33735 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02495.t1 Aspi01Gene02495 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03455.t1 Aspi01Gene03455 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19500.t2 Aspi01Gene19500 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g28085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.02 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Dac_g36012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28787 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36007 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009196 No alias not classified & original description: CDS=1-579 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021770 EMB2758 not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09254 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 292 316
IPR002885 Pentatricopeptide_repeat 191 214
IPR002885 Pentatricopeptide_repeat 217 263
IPR002885 Pentatricopeptide_repeat 319 364
IPR002885 Pentatricopeptide_repeat 17 64
IPR002885 Pentatricopeptide_repeat 118 165
No external refs found!