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  5. Cba_g20719

Cba_g20719 (PNC1)


Aliases : PNC1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0003267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20719

Target Alias Description ECC score Gene Family Method Actions
AT5G27520 PNC2 peroxisomal adenine nucleotide carrier 2 0.06 OrthoFinder output from all 47 species
GSVIVT01000043001 PNC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
LOC_Os05g32630.1 PNC1, LOC_Os05g32630 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Nbi_g07306 PNC1 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098910.3.1 PNC1, Solyc01g098910 solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species
Zm00001e027201_P001 PNC1, Zm00001e027201 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 106 187
IPR018108 Mitochondrial_sb/sol_carrier 208 307
IPR018108 Mitochondrial_sb/sol_carrier 7 98
No external refs found!