Cba_g20596


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20596

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00210350 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00031710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.02 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13687 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0125.g048537 No alias not classified & original description: CDS=1-2229 0.1 OrthoFinder output from all 47 species
Cba_g07157 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g11783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g30012 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G011500.1 Ceric.03G011500 not classified & original description: pacid=50571528... 0.03 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.04 OrthoFinder output from all 47 species
Ceric.08G040300.1 Ceric.08G040300 not classified & original description: pacid=50638085... 0.03 OrthoFinder output from all 47 species
Ceric.13G010800.1 Ceric.13G010800 not classified & original description: pacid=50634967... 0.03 OrthoFinder output from all 47 species
Ceric.16G047600.1 Ceric.16G047600 not classified & original description: pacid=50589369... 0.05 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.09 OrthoFinder output from all 47 species
Ceric.29G081200.1 OTP86, Ceric.29G081200 not classified & original description: pacid=50624479... 0.04 OrthoFinder output from all 47 species
Dac_g04703 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24746 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07839 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51083 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Len_g19583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100287g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_100519g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.12 OrthoFinder output from all 47 species
MA_10427854g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_20746g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05129 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12777 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g43610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59977 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g61725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo107359 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo116755 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo130525 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.05 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Spa_g01739 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16936 MEF21 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 85 131
IPR002885 Pentatricopeptide_repeat 160 185
IPR002885 Pentatricopeptide_repeat 188 207
No external refs found!