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  5. Cba_g20554

Cba_g20554


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20554
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30770 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70575.t1 Aspi01Gene70575 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20826 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17413 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 50 73
No external refs found!