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  5. Cba_g20530

Cba_g20530 (ECT8)


Aliases : ECT8

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20530
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Adi_g045720 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37060 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12670 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16306 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17655 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023248001 ECT11 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01029460001 ECT5 No description available 0.03 OrthoFinder output from all 47 species
Gb_17619 ECT2 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Gb_38284 ECT5 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g06240.1 ECT4, LOC_Os03g06240 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
Len_g23805 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55797 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02026 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16648 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22621 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429321g0010 ECT7 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
MA_10435373g0010 ECT8 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Mp1g00140.1 ECT5 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Nbi_g03142 ECT7 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06556 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16704 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24503 ECT10 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35979 No alias methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g103540.3.1 ECT11, Solyc01g103540 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10780 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46273 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021892_P001 ECT7, Zm00001e021892 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Zm00001e039003_P004 ECT2, Zm00001e039003 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 6 148
No external refs found!