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  5. Cba_g20226

Cba_g20226


Description : transcription termination factor *(TTF1) & original description: none


Gene families : OG0003814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20226

Target Alias Description ECC score Gene Family Method Actions
Adi_g115174 No alias transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17698.t1 Aspi01Gene17698 transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species
Msp_g06359 No alias transcription termination factor *(TTF1) & original... 0.06 OrthoFinder output from all 47 species
Sam_g04102 No alias transcription termination factor *(TTF1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g24191 No alias transcription termination factor *(TTF1) & original... 0.02 OrthoFinder output from all 47 species
Smo419617 AtMYB50, MYB50 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Spa_g16559 No alias transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!