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  5. Cba_g20204

Cba_g20204


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19267 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G053300.1 Ceric.01G053300 not classified & original description: pacid=50592097... 0.03 OrthoFinder output from all 47 species
Ceric.18G040700.1 Ceric.18G040700 not classified & original description: pacid=50621172... 0.03 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.04 OrthoFinder output from all 47 species
Dac_g10245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.03 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.02 OrthoFinder output from all 47 species
Msp_g08360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013443 No alias not classified & original description: CDS=271-3063 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017387 No alias not classified & original description: CDS=5-859 0.02 OrthoFinder output from all 47 species
Sam_g04265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.03 OrthoFinder output from all 47 species
Solyc06g068850.4.1 Solyc06g068850 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 87.4) 0.03 OrthoFinder output from all 47 species
Solyc09g074380.4.1 Solyc09g074380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 50 172
No external refs found!