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  5. Cba_g20180

Cba_g20180


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20180

Target Alias Description ECC score Gene Family Method Actions
Als_g08855 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g15949 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30442 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24414.t1 Aspi01Gene24414 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31112.t1 Aspi01Gene31112 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32964.t1 Aspi01Gene32964 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene59741.t2 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59764.t2 Aspi01Gene59764 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene70044.t1 Aspi01Gene70044 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g05727 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g13122 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g46936 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06057 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06739 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13705 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g03175 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g15893 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g36484 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01961 PHR1, AtPHR1 transcription factor *(PHR1) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g04816 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g37137 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03482 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19411 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g27868 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06853 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g03896 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 136 182
IPR001005 SANT/Myb 53 103
No external refs found!