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  5. Cba_g19858

Cba_g19858


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19858

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0015.g013874 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ehy_g00813 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Len_g02329 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Mp1g25860.1 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g04015 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 162 205
IPR006652 Kelch_1 208 255
IPR001810 F-box_dom 73 110
No external refs found!