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  5. AMTR_s00030p00241220

AMTR_s00030p00241220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.211

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase


Gene families : OG_01_0003912 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003912_tree ,
OG_02_0003948 (LandPlants) Phylogenetic Tree(s): OG_02_0003948_tree ,
OG_03_0004055 (SeedPlants) Phylogenetic Tree(s): OG_03_0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00241220
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G50920 No alias Nucleolar GTP-binding protein 0.05 Archaeplastida
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Gb_00431 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
Gb_05997 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida
LOC_Os07g01920.1 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida
Pp3c20_4830V3.1 No alias Nucleolar GTP-binding protein 0.1 Archaeplastida
Pp3c23_20710V3.1 No alias Nucleolar GTP-binding protein 0.02 Archaeplastida
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Solyc07g053730.4.1 No alias NOG1 LSU processome regulatory GTPase 0.05 Archaeplastida
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.07 Archaeplastida
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.04 Archaeplastida
AT1G50920 No alias Nucleolar GTP-binding protein 0.05 LandPlants
Gb_00431 No alias NOG1 LSU processome regulatory GTPase 0.04 LandPlants
Gb_05997 No alias NOG1 LSU processome regulatory GTPase 0.02 LandPlants
LOC_Os07g01920.1 No alias NOG1 LSU processome regulatory GTPase 0.04 LandPlants
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.03 LandPlants
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.02 LandPlants
Pp3c20_4830V3.1 No alias Nucleolar GTP-binding protein 0.1 LandPlants
Pp3c23_20710V3.1 No alias Nucleolar GTP-binding protein 0.02 LandPlants
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 LandPlants
Solyc07g053730.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 LandPlants
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.07 LandPlants
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.04 LandPlants
AT1G50920 No alias Nucleolar GTP-binding protein 0.05 SeedPlants
Gb_00431 No alias NOG1 LSU processome regulatory GTPase 0.03 SeedPlants
Gb_05997 No alias NOG1 LSU processome regulatory GTPase 0.02 SeedPlants
LOC_Os07g01920.1 No alias NOG1 LSU processome regulatory GTPase 0.04 SeedPlants
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.03 SeedPlants
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 SeedPlants
Solyc07g053730.4.1 No alias NOG1 LSU processome regulatory GTPase 0.03 SeedPlants
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.06 SeedPlants
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
MF GO:0015093 ferrous iron transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012973 NOG_C 409 463
IPR010674 NOG1_Rossman_fold_dom 235 292
No external refs found!