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  5. Cba_g19566

Cba_g19566


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19566

Target Alias Description ECC score Gene Family Method Actions
Als_g04940 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g26570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28029 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04668 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29653 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48025 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33982 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 330 353
IPR002885 Pentatricopeptide_repeat 734 758
IPR002885 Pentatricopeptide_repeat 431 455
IPR002885 Pentatricopeptide_repeat 229 251
IPR002885 Pentatricopeptide_repeat 633 657
IPR032867 DYW_dom 1072 1162
IPR002885 Pentatricopeptide_repeat 457 503
IPR002885 Pentatricopeptide_repeat 760 806
IPR002885 Pentatricopeptide_repeat 153 202
IPR002885 Pentatricopeptide_repeat 861 908
IPR002885 Pentatricopeptide_repeat 355 403
IPR002885 Pentatricopeptide_repeat 658 706
IPR002885 Pentatricopeptide_repeat 256 301
IPR002885 Pentatricopeptide_repeat 557 605
No external refs found!