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  5. Cba_g19565

Cba_g19565 (IXR1, CEV1, CESA3,...)


Aliases : IXR1, CEV1, CESA3, ATCESA3, ATH-B

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19565

Target Alias Description ECC score Gene Family Method Actions
AT4G32410 AtCESA1, RSW1, CESA1 cellulose synthase 1 0.02 OrthoFinder output from all 47 species
AT4G39350 ATH-A, CESA2, ATCESA2 cellulose synthase A2 0.03 OrthoFinder output from all 47 species
AT5G05170 IXR1, CEV1,... Cellulose synthase family protein 0.02 OrthoFinder output from all 47 species
Aev_g13769 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aev_g38562 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ala_g38546 CESA5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013471001 ATH-A, CESA2, ATCESA2 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01032096001 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01035830001 AtCESA1, RSW1, CESA1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
LOC_Os05g08370.1 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Len_g19077 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Lfl_g10118 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
MA_10435322g0010 AtCESA1, RSW1, CESA1 Probable cellulose synthase A catalytic subunit 2... 0.02 OrthoFinder output from all 47 species
Mp2g02440.1 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Mp5g24530.1 ATCSLD2, CSLD2 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Pir_g19942 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ppi_g18791 MUR10, ATCESA7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13860 No alias catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Solyc07g043390.4.1 ATCSLG3, CSLG3,... Cellulose synthase-like protein G1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g075550.3.1 ATCSLD5, CSLD5,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Spa_g17444 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Zm00001e026711_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Zm00001e037015_P002 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR027934 CES_Znf_RING 22 92
IPR005150 Cellulose_synth 352 1077
No external refs found!