Cba_g19516

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g19516

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene16842.t1	Aspi01Gene16842	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008437	No alias	pectin methylesterase & original description: CDS=79-1257	0.04	OrthoFinder output from all 47 species
Ceric.11G006400.1	Ceric.11G006400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G006500.1	Ceric.11G006500	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g25225	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01038754001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Msp_g08672	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g37045	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g39490	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	92	377

External Links

No external refs found!