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  5. Cba_g19514

Cba_g19514 (HCF136)


Aliases : HCF136

Description : protein involved in PS-II assembly *(HCF136) & original description: none


Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19514
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083110 HCF136,... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.1 OrthoFinder output from all 47 species
Adi_g023753 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Aev_g35613 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Ala_g31805 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Als_g23347 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Aob_g06472 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Aop_g09964 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72238.t1 HCF136, Aspi01Gene72238 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012492 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G037400.1 HCF136, Ceric.10G037400 protein involved in PS-II assembly *(HCF136) & original... 0.11 OrthoFinder output from all 47 species
Cre06.g273700 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Dac_g14607 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g01147 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Dde_g00586 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20509 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01012045001 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
Gb_03750 HCF136 HCF136 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Len_g11400 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g02953 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
MA_10433328g0010 HCF136 HCF136 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Mp4g23900.1 HCF136 HCF136 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Msp_g03512 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14696 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Ore_g40589 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10204 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Pnu_g05859 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Ppi_g00841 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009047 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Sam_g07654 No alias protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Smo227615 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Solyc02g014150.4.1 HCF136, Solyc02g014150 HCF136 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Spa_g12995 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Tin_g11749 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e030125_P002 HCF136, Zm00001e030125 HCF136 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 98 418
No external refs found!